1 problem you have is that's wayyyy too big. The fuse under the hood should equal(or be at most 10A more than) the sum of the amperage of the fuses on your amp.
My amp has 4 30 amps fuses which = 120A so I have a 120A fuse under the hood.
I believe you said your amp has a 20A fuse so you need a 20-30A under the hood.
With 100A fuse and the amp only drawing ~20A, you can actually burn the wire over time.
I see this way too much. Sure a lot of amp kits come with 100A fuse, but most people don't need that.
I've seen problems with this first hand when my buddy's amp kept cutting out last year and I found out he had 2 30s on the amp and 100A fuse under the hood. We put a 60A fuse under the hood, problem free.
Change that first and then see if it still feels sluggish.
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Like you said, came with the kit, why its in there. I will swap it out with a 30a, for good measure, but even still that leaves my current draw over the amperage of the alternator so I don't see it fixing the issue. But for the cost of a fuse I'll try that first for sure. Thanks